ISMARA results: ELK1,4

Motif ID: ELK1,4_GABP{A,B1}.p3

$logo of ELK1,4_GABP{A,B1}.p3$

Gene Symbol	Entrez ID	Gene Name
ELK1	2002	ELK1, member of ETS oncogene family
ELK4	2005	ELK4, ETS-domain protein (SRF accessory protein 1)
GABPA	2551	GA binding protein transcription factor, alpha subunit 60kDa
GABPB1	2553	GA binding protein transcription factor, beta subunit 1

Gene	Promoter	Pearson	P-value	Plot
GABPA	chr21_+_27107731	0.53	1.8e-01	Click!
ELK4	chr1_-_205601999	0.47	2.4e-01	Click!
ELK1	chrX_-_47509993	0.41	3.2e-01	Click!
GABPB1	chr15_-_50647385	0.39	3.4e-01	Click!

$activity profile for motif ELK1,4_GABP{A,B1}.p3$

$Sorted Z-values for motif ELK1,4_GABP{A,B1}.p3$

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Promoter	Score	Refseq	Gene Symbol	Gene Name
chrX_-_15872905	3.259
chrX_-_15872921	3.234		AP1S2	adaptor-related protein complex 1, sigma 2 subunit
chr1_+_22351984	2.707		LINC00339	long intergenic non-protein coding RNA 339
chrX_-_15872882	2.638		AP1S2	adaptor-related protein complex 1, sigma 2 subunit
chr5_+_180650233	2.520	NM_033549 NM_201627	TRIM41	tripartite motif containing 41
chr2_+_109745996	2.505	NM_001099289	SH3RF3	SH3 domain containing ring finger 3
chr5_+_180650274	2.449		TRIM41	tripartite motif containing 41
chrX_-_106959597	2.305	NM_001015881	TSC22D3	TSC22 domain family, member 3
chr13_-_33760215	2.266	NM_001243466 NM_178007	STARD13	StAR-related lipid transfer (START) domain containing 13
chrX_-_153775774	2.200	NM_001042351	G6PD	glucose-6-phosphate dehydrogenase
chr5_+_180650709	2.181		TRIM41	tripartite motif containing 41
chr6_+_30524662	2.177		PRR3	proline rich 3
chrX_-_153775427	2.143		G6PD	glucose-6-phosphate dehydrogenase
chr12_-_105629790	2.121	NM_001251904 NM_018171	APPL2	adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
chrX_-_15872938	2.120		AP1S2	adaptor-related protein complex 1, sigma 2 subunit
chr11_-_46722139	2.084		ARHGAP1	Rho GTPase activating protein 1
chrX_-_15872871	2.013		AP1S2	adaptor-related protein complex 1, sigma 2 subunit
chr8_+_38034357	2.006		BAG4	BCL2-associated athanogene 4
chr9_-_88969256	1.988		ZCCHC6	zinc finger, CCHC domain containing 6
chr10_-_1102643	1.979		IDI1	isopentenyl-diphosphate delta isomerase 1

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enrichment	p-value	GO term	description
3.68	3.15e-02	GO:0006376	mRNA splice site selection
2.84	4.66e-03	GO:0000245	spliceosome assembly
2.81	1.97e-02	GO:0000387	spliceosomal snRNP assembly
2.81	1.97e-02	GO:0006903	vesicle targeting
2.51	2.57e-07	GO:0006415	translational termination
2.49	3.20e-18	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile
2.49	3.20e-18	GO:0000398	nuclear mRNA splicing, via spliceosome
2.48	2.37e-18	GO:0000375	RNA splicing, via transesterification reactions
2.45	3.85e-02	GO:0006369	termination of RNA polymerase II transcription
2.43	4.04e-06	GO:0019080	viral genome expression
2.43	4.04e-06	GO:0019083	viral transcription
2.43	6.09e-06	GO:0022618	ribonucleoprotein complex assembly
2.42	3.45e-07	GO:0043241	protein complex disassembly
2.42	3.45e-07	GO:0043624	cellular protein complex disassembly
2.40	4.36e-06	GO:0071826	ribonucleoprotein complex subunit organization
2.39	1.80e-02	GO:0050434	positive regulation of viral transcription
2.38	4.31e-04	GO:0051436	negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle
2.38	1.49e-03	GO:0006977	DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
2.38	1.49e-03	GO:0072395	signal transduction involved in cell cycle checkpoint
2.38	1.49e-03	GO:0072401	signal transduction involved in DNA integrity checkpoint

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enrichment	p-value	GO term	description
3.83	2.23e-02	GO:0005732	small nucleolar ribonucleoprotein complex
3.26	6.48e-04	GO:0005689	U12-type spliceosomal complex
3.17	2.57e-05	GO:0030532	small nuclear ribonucleoprotein complex
2.67	3.92e-09	GO:0071013	catalytic step 2 spliceosome
2.48	5.95e-13	GO:0005681	spliceosomal complex
2.48	3.50e-02	GO:0022627	cytosolic small ribosomal subunit
2.38	2.54e-04	GO:0015934	large ribosomal subunit
2.28	1.24e-04	GO:0022626	cytosolic ribosome
2.23	2.24e-03	GO:0000502	proteasome complex
2.20	1.33e-34	GO:0030529	ribonucleoprotein complex
2.20	2.23e-03	GO:0030117	membrane coat
2.20	2.23e-03	GO:0048475	coated membrane
2.16	4.91e-11	GO:0005840	ribosome
2.07	1.25e-05	GO:0016607	nuclear speck
2.06	2.70e-03	GO:0000790	nuclear chromatin
2.03	5.66e-07	GO:0044445	cytosolic part
1.97	2.85e-09	GO:0016604	nuclear body
1.89	2.28e-04	GO:0000151	ubiquitin ligase complex
1.89	9.50e-03	GO:0005925	focal adhesion
1.80	3.64e-02	GO:0005924	cell-substrate adherens junction

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enrichment	p-value	GO term	description
2.20	4.84e-09	GO:0003735	structural constituent of ribosome
1.67	5.92e-18	GO:0003723	RNA binding
1.65	9.55e-04	GO:0019787	small conjugating protein ligase activity
1.64	2.59e-03	GO:0004842	ubiquitin-protein ligase activity
1.60	1.04e-02	GO:0003713	transcription coactivator activity
1.56	5.13e-03	GO:0016881	acid-amino acid ligase activity
1.52	8.13e-03	GO:0016879	ligase activity, forming carbon-nitrogen bonds
1.49	2.22e-03	GO:0000988	protein binding transcription factor activity
1.49	2.22e-03	GO:0000989	transcription factor binding transcription factor activity
1.48	3.36e-03	GO:0003712	transcription cofactor activity
1.38	2.44e-04	GO:0019899	enzyme binding
1.34	3.65e-23	GO:0003676	nucleic acid binding
1.28	4.62e-08	GO:0008270	zinc ion binding
1.24	1.31e-06	GO:0003677	DNA binding
1.23	2.59e-33	GO:0005515	protein binding
1.22	4.05e-05	GO:0046914	transition metal ion binding
1.17	1.48e-02	GO:0000166	nucleotide binding
1.12	9.82e-31	GO:0005488	binding
1.12	1.98e-02	GO:0046872	metal ion binding
1.11	4.33e-02	GO:0043167	ion binding